PPP1R3A protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

PPP1R3A

Protein phosphatase 1 regulatory subunit 3A. (1114 aa)

Predicted Functional Partners:

GYS1

0.978

PPP1CB

0.968

GYS2

0.965

LOC100410496

0.943

PPP1CC

0.943

PPP1CA

0.940

PPP1R3D

0.928

PPP1R3E

0.928

PPP1R3C

0.928

PPP1R3B

0.928

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GYS1	GYS2	ENSCJAP00000000409	ENSCJAP00000063327	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.910
GYS1	LOC100410496	ENSCJAP00000000409	ENSCJAP00000029920	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.956
GYS1	PPP1CA	ENSCJAP00000000409	ENSCJAP00000001692	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.963
GYS1	PPP1CB	ENSCJAP00000000409	ENSCJAP00000055137	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.950
GYS1	PPP1CC	ENSCJAP00000000409	ENSCJAP00000052805	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.956
GYS1	PPP1R3A	ENSCJAP00000000409	ENSCJAP00000031318	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3A.	0.978
GYS1	PPP1R3B	ENSCJAP00000000409	ENSCJAP00000072060	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit.	0.983
GYS1	PPP1R3C	ENSCJAP00000000409	ENSCJAP00000059471	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.998
GYS1	PPP1R3D	ENSCJAP00000000409	ENSCJAP00000034971	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit.	0.983
GYS1	PPP1R3E	ENSCJAP00000000409	ENSCJAP00000059356	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3E.	0.981
GYS2	GYS1	ENSCJAP00000063327	ENSCJAP00000000409	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.910
GYS2	LOC100410496	ENSCJAP00000063327	ENSCJAP00000029920	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.946
GYS2	PPP1CA	ENSCJAP00000063327	ENSCJAP00000001692	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.952
GYS2	PPP1CB	ENSCJAP00000063327	ENSCJAP00000055137	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.946
GYS2	PPP1CC	ENSCJAP00000063327	ENSCJAP00000052805	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.946
GYS2	PPP1R3A	ENSCJAP00000063327	ENSCJAP00000031318	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3A.	0.965
GYS2	PPP1R3B	ENSCJAP00000063327	ENSCJAP00000072060	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit.	0.979
GYS2	PPP1R3C	ENSCJAP00000063327	ENSCJAP00000059471	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.996
GYS2	PPP1R3D	ENSCJAP00000063327	ENSCJAP00000034971	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit.	0.979
GYS2	PPP1R3E	ENSCJAP00000063327	ENSCJAP00000059356	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	Protein phosphatase 1 regulatory subunit 3E.	0.973