STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3orf20Chromosome 3 open reading frame 20. (910 aa)    
Predicted Functional Partners:
MRPL41
Uncharacterized protein.
   
 
 0.736
MRPL32
Mitochondrial ribosomal protein L32.
   
 
 0.732
MRPL20
Mitochondrial ribosomal protein L20.
   
 
 0.726
MRPL40
39S ribosomal protein L40, mitochondrial.
   
   0.710
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1.
   
 
 0.707
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.703
MRPL30
39S ribosomal protein L30, mitochondrial.
   
   0.697
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.678
DAP3
Death associated protein 3.
   
 
 0.669
MRPS22
Mitochondrial ribosomal protein S22.
   
 
 0.666
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.