STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS17ADAM metallopeptidase with thrombospondin type 1 motif 17. (1123 aa)    
Predicted Functional Partners:
B3GALTL
Beta-1,3-glucosyltransferase.
    
 0.779
FBN1
Fibrillin 1.
   
 0.712
POFUT2
Uncharacterized protein.
     
 0.707
FBN2
Fibrillin 2.
   
 0.701
TSR1
TSR1 ribosome maturation factor.
   
  
 0.565
LTBP2
Latent transforming growth factor beta binding protein 2.
    
 0.501
GDF10
Bone morphogenetic protein 3; Belongs to the TGF-beta family.
      
 0.469
PPIB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  
 0.454
ACAN
Aggrecan.
     
 0.435
ADAMTSL4
ADAMTS like 4.
     
0.404
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.