STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF579Zinc finger protein 579. (562 aa)    
Predicted Functional Partners:
NAT14
N-acetyltransferase 14 (putative).
  
  
 0.657
PPP6R1
Serine/threonine-protein phosphatase 6 regulatory subunit 1.
    
 0.516
ISOC2
Isochorismatase domain containing 2.
    
 
 0.477
HMX1
H6 family homeobox 1.
  
 
   0.431
RBM23
RNA binding motif protein 23.
    
   0.416
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.405
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.