STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRR1Leucine rich repeat protein 1. (414 aa)    
Predicted Functional Partners:
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.970
RBX1
E3 ubiquitin-protein ligase RBX1.
   
 0.905
ENSCJAP00000073823
Zf-rbx1 domain-containing protein.
   
 0.905
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
   
 
 0.887
TCEB2
Transcription elongation factor B polypeptide 2 isoform a.
    
 0.845
F7IQU3_CALJA
Ubiquitin-like domain-containing protein.
    
 0.845
ENSCJAP00000071001
Ubiquitin-like domain-containing protein.
    
 0.845
WDHD1
Uncharacterized protein.
   
 
 0.837
F7HV22_CALJA
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.821
ENSCJAP00000052967
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.821
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.