STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF1Polycomb group RING finger protein 1. (259 aa)    
Predicted Functional Partners:
RYBP
RanBP2-type domain-containing protein.
    
 0.985
RING1
E3 ubiquitin-protein ligase RING1.
   
 0.984
KDM2B
Lysine demethylase 2B.
   
 0.961
RNF2
E3 ubiquitin-protein ligase RING2.
   
 0.945
ENSCJAP00000074583
RAWUL domain-containing protein.
   
 0.945
BCOR
ANK_REP_REGION domain-containing protein.
    
 0.936
YAF2
YY1-associated factor 2 isoform 1.
    
 0.925
CBX8
Chromobox 8.
    
 0.901
SKP1
S-phase kinase-associated protein 1 isoform b; Belongs to the SKP1 family.
    
 0.886
CBX7
Chromobox protein homolog 7.
    
 0.877
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.