STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROMO1Reactive oxygen species modulator 1. (79 aa)    
Predicted Functional Partners:
LOC100415763
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 
 0.651
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
   
   0.647
COX5B
Cytochrome c oxidase subunit 5B.
   
 
 0.635
UQCRQ
Ubiquinol-cytochrome c reductase complex III subunit VII.
   
  
 0.631
NDUFB8
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
  
 0.626
TIMM10
Mitochondrial import inner membrane translocase subunit Tim10.
   
  
 0.618
PRND
Prion like protein doppel.
      
 0.618
LOC100895863
Cytochrome b-c1 complex subunit 10.
   
  
 0.589
TIMM21
Translocase of inner mitochondrial membrane 21.
    
 
 0.589
NDUFB9
NADH:ubiquinone oxidoreductase subunit B9; Belongs to the complex I LYR family.
   
  
 0.568
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.