Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO2 | DDX6 | ENSCJAP00000056892 | ENSCJAP00000025033 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. | 0.935 |
| AGO2 | DICER1 | ENSCJAP00000056892 | ENSCJAP00000051203 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Endoribonuclease Dicer isoform 1; Belongs to the helicase family. Dicer subfamily. | 0.990 |
| AGO2 | FMR1 | ENSCJAP00000056892 | ENSCJAP00000056898 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Uncharacterized protein. | 0.798 |
| AGO2 | FXR1 | ENSCJAP00000056892 | ENSCJAP00000023572 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | FMR1 autosomal homolog 1. | 0.896 |
| AGO2 | MTDH | ENSCJAP00000056892 | ENSCJAP00000009264 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Protein LYRIC. | 0.547 |
| AGO2 | SERBP1 | ENSCJAP00000056892 | ENSCJAP00000032220 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | SERPINE1 mRNA binding protein 1. | 0.459 |
| AGO2 | SND1 | ENSCJAP00000056892 | ENSCJAP00000032645 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. | 0.757 |
| AGO2 | XPO5 | ENSCJAP00000056892 | ENSCJAP00000045858 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Exportin 5. | 0.917 |
| DDX6 | AGO2 | ENSCJAP00000025033 | ENSCJAP00000056892 | Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.935 |
| DDX6 | DICER1 | ENSCJAP00000025033 | ENSCJAP00000051203 | Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. | Endoribonuclease Dicer isoform 1; Belongs to the helicase family. Dicer subfamily. | 0.734 |
| DDX6 | FMR1 | ENSCJAP00000025033 | ENSCJAP00000056898 | Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.445 |
| DDX6 | FXR1 | ENSCJAP00000025033 | ENSCJAP00000023572 | Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. | FMR1 autosomal homolog 1. | 0.543 |
| DDX6 | SERBP1 | ENSCJAP00000025033 | ENSCJAP00000032220 | Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. | SERPINE1 mRNA binding protein 1. | 0.445 |
| DDX6 | SND1 | ENSCJAP00000025033 | ENSCJAP00000032645 | Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. | Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. | 0.712 |
| DDX6 | XPO5 | ENSCJAP00000025033 | ENSCJAP00000045858 | Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. | Exportin 5. | 0.627 |
| DICER1 | AGO2 | ENSCJAP00000051203 | ENSCJAP00000056892 | Endoribonuclease Dicer isoform 1; Belongs to the helicase family. Dicer subfamily. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.990 |
| DICER1 | DDX6 | ENSCJAP00000051203 | ENSCJAP00000025033 | Endoribonuclease Dicer isoform 1; Belongs to the helicase family. Dicer subfamily. | Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. | 0.734 |
| DICER1 | FMR1 | ENSCJAP00000051203 | ENSCJAP00000056898 | Endoribonuclease Dicer isoform 1; Belongs to the helicase family. Dicer subfamily. | Uncharacterized protein. | 0.717 |
| DICER1 | FXR1 | ENSCJAP00000051203 | ENSCJAP00000023572 | Endoribonuclease Dicer isoform 1; Belongs to the helicase family. Dicer subfamily. | FMR1 autosomal homolog 1. | 0.604 |
| DICER1 | SND1 | ENSCJAP00000051203 | ENSCJAP00000032645 | Endoribonuclease Dicer isoform 1; Belongs to the helicase family. Dicer subfamily. | Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. | 0.732 |
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