STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC136Coiled-coil domain containing 136. (1144 aa)    
Predicted Functional Partners:
MYH4
Myosin heavy chain 4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.671
MYL4
Myosin light chain 4.
    
 0.659
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
    
 0.642
PDRG1
P53 and DNA damage-regulated protein 1.
    
 
 0.627
SLC12A6
Solute carrier family 12 member 6.
    
 0.597
ALMS1
ALMS1 centrosome and basal body associated protein.
  
 
 0.533
SIGLEC11
Uncharacterized protein.
  
 
 0.486
SIGLEC10
Uncharacterized protein.
  
 
 0.482
FCMR
Fc fragment of IgM receptor.
  
 
  0.480
MEGF10
Multiple EGF like domains 10.
    
 0.478
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.