STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXL1Lysyl oxidase homolog 1 preproprotein. (575 aa)    
Predicted Functional Partners:
FBLN5
Fibulin 5.
   
 0.916
FBN1
Fibrillin 1.
   
 
 0.798
BGN
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
   
 0.744
LTBP2
Latent transforming growth factor beta binding protein 2.
   
 
 0.673
TMTC2
Transmembrane O-mannosyltransferase targeting cadherins 2.
    
 0.603
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
   
 0.598
MYOC
Myocilin.
   
  
 0.591
OMD
Osteomodulin.
   
 0.588
FMOD
Fibromodulin.
   
 0.587
MFAP2
Microfibril associated protein 2.
   
 
 0.585
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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