STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE8Copine-8. (564 aa)    
Predicted Functional Partners:
MSRB3
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
      
 0.781
POPDC3
Popeye domain containing 3.
      
 0.772
SLF1
Ankyrin repeat domain-containing protein 32.
      
 0.728
BRINP3
BMP/retinoic acid inducible neural specific 3.
   
  
 0.513
LRRC7
Leucine rich repeat containing 7.
   
 
 0.508
ROBO1
Roundabout guidance receptor 1.
      
 0.503
DSCAML1
DS cell adhesion molecule like 1.
   
 
 0.492
ADGRL2
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.463
CNTNAP5
Contactin-associated protein-like 5.
   
  
 0.454
ENSCJAP00000062228
Uncharacterized protein.
   
 
 0.452
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.