STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC13Uncharacterized protein. (683 aa)    
Predicted Functional Partners:
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
  
 0.897
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.881
PALB2
Partner and localizer of BRCA2.
  
 
 0.881
PDE6C
Phosphodiesterase.
      
 0.858
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
      
 0.805
CEP164
Centrosomal protein 164.
      
 0.788
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
      
 0.756
OCA2
OCA2 melanosomal transmembrane protein.
   
  
 0.751
CCDC18
Coiled-coil domain containing 18.
    
 
 0.544
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.539
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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