STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF6Polycomb group RING finger protein 6 isoform a. (350 aa)    
Predicted Functional Partners:
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
   
 0.960
RING1
E3 ubiquitin-protein ligase RING1.
   
 0.950
RYBP
RanBP2-type domain-containing protein.
    
 0.945
RNF2
E3 ubiquitin-protein ligase RING2.
   
 0.933
ENSCJAP00000074583
RAWUL domain-containing protein.
   
 0.933
YAF2
YY1-associated factor 2 isoform 1.
    
 0.922
CBX3
Chromobox protein homolog 3.
   
 0.914
E2F6
E2F transcription factor 6.
    
 0.882
ENSCJAP00000075043
E2F_TDP domain-containing protein.
    
 0.882
ENSCJAP00000067326
Uncharacterized protein.
   
 0.863
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.