STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS3Galectin. (248 aa)    
Predicted Functional Partners:
LGALS3BP
BACK domain-containing protein.
    
 
 0.871
TRIM16
B30.2/SPRY domain-containing protein.
    
 
 0.841
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 
 0.715
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
   
  
 0.691
FCGR2A
Uncharacterized protein.
   
 
 0.690
CLEC7A
C-type lectin domain containing 7A.
   
 0.688
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.682
TREM2
Triggering receptor expressed on myeloid cells 2.
   
  
 0.673
EGFR
Receptor protein-tyrosine kinase.
    
 
 0.670
LAG3
Lymphocyte activating 3.
    
 0.664
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.