STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUFY4RUN and FYVE domain containing 4. (571 aa)    
Predicted Functional Partners:
RUFY2
RUN and FYVE domain-containing protein 2 isoform a.
    
 
0.560
ZNF142
Zinc finger protein 142.
      
 0.552
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.533
STK36
Serine/threonine kinase 36.
      
 0.501
TTLL7
Tubulin tyrosine ligase like 7.
      
 0.447
MICU1
Mitochondrial calcium uptake 1.
   
 0.442
MICU2
EF-hand domain-containing family member A1.
   
 0.442
MCU
Calcium uniporter protein, mitochondrial isoform 1.
     
 0.433
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
     
 0.433
TMBIM1
Protein lifeguard 3; Belongs to the BI1 family.
   
  
 0.403
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.