STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEDAGMesenteric estrogen dependent adipogenesis. (303 aa)    
Predicted Functional Partners:
MTCH2
Mitochondrial carrier homolog 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.620
MED23
Mediator complex subunit 23.
      
 0.617
B3GALTL
Beta-1,3-glucosyltransferase.
      
 0.556
OPN5
Opsin 5; Belongs to the G-protein coupled receptor 1 family.
      
 0.545
CDX4
Caudal type homeobox 4.
      
 0.515
PLPP1
Phospholipid phosphatase 1.
      
 0.506
TSR3
Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.502
PROSER1
Proline and serine-rich protein 1.
      
 0.502
REPIN1
Replication initiator 1 isoform 3.
      
 0.501
GJB4
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.501
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.