STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM223Transmembrane protein 223. (201 aa)    
Predicted Functional Partners:
TMEM147
Transmembrane protein 147 isoform 1.
   
  
 0.617
TMEM53
Transmembrane protein 53.
      
 0.584
SMIM4
Small integral membrane protein 4.
   
  
 0.568
TMEM101
Transmembrane protein 101.
   
  
 0.560
PDZK1IP1
PDZK1-interacting protein 1.
      
 0.530
TMEM154
Transmembrane protein 154.
      
 0.493
TMEM238L
Transmembrane protein 238 like.
      
 0.445
TMEM38A
Trimeric intracellular cation channel type A.
      
 0.444
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.