STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA20Spermatogenesis-associated protein 20; May play a role in fertility regulation. (802 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthetase.
    
  0.762
SPATA6
Spermatogenesis-associated protein 6.
      
 0.565
COASY
Coenzyme A synthase.
      
 0.550
SAT2
Spermidine/spermine N1-acetyltransferase family member 2.
      
 0.545
PUSL1
tRNA pseudouridine synthase.
      
 0.544
SPATA4
Spermatogenesis associated 4.
      
 0.521
SRRM1
PWI domain-containing protein.
      
 0.516
SPATA7
Spermatogenesis associated 7.
      
 0.499
SPATA46
Spermatogenesis associated 46.
      
 0.465
SPATA3
Spermatogenesis associated 3.
      
 0.465
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.