ADAM19 protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ADAM19

Uncharacterized protein. (955 aa)

Predicted Functional Partners:

SH3PXD2A

0.662

SPON2

0.644

LGI4

0.574

WIF1

0.532

LGALS14

0.499

THG1L

0.463

SNAI2

0.448

VPS13A

0.447

F6ZCB9_CALJA

0.410

SLC12A7

0.403

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADAM19	F6ZCB9_CALJA	ENSCJAP00000035196	ENSCJAP00000037865	Uncharacterized protein.	Formin binding protein 1.	0.410
ADAM19	LGALS14	ENSCJAP00000035196	ENSCJAP00000055940	Uncharacterized protein.	Galectin.	0.499
ADAM19	LGI4	ENSCJAP00000035196	ENSCJAP00000019594	Uncharacterized protein.	Leucine-rich repeat LGI family member 4.	0.574
ADAM19	SH3PXD2A	ENSCJAP00000035196	ENSCJAP00000074640	Uncharacterized protein.	SH3 and PX domains 2A.	0.662
ADAM19	SLC12A7	ENSCJAP00000035196	ENSCJAP00000073280	Uncharacterized protein.	AA_permease domain-containing protein.	0.403
ADAM19	SNAI2	ENSCJAP00000035196	ENSCJAP00000024825	Uncharacterized protein.	Snail family transcriptional repressor 2.	0.448
ADAM19	SPON2	ENSCJAP00000035196	ENSCJAP00000052951	Uncharacterized protein.	Spondin-2.	0.644
ADAM19	THG1L	ENSCJAP00000035196	ENSCJAP00000035252	Uncharacterized protein.	tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.	0.463
ADAM19	VPS13A	ENSCJAP00000035196	ENSCJAP00000005922	Uncharacterized protein.	Uncharacterized protein.	0.447
ADAM19	WIF1	ENSCJAP00000035196	ENSCJAP00000026960	Uncharacterized protein.	Wnt inhibitory factor 1.	0.532
F6ZCB9_CALJA	ADAM19	ENSCJAP00000037865	ENSCJAP00000035196	Formin binding protein 1.	Uncharacterized protein.	0.410
F6ZCB9_CALJA	SLC12A7	ENSCJAP00000037865	ENSCJAP00000073280	Formin binding protein 1.	AA_permease domain-containing protein.	0.409
LGALS14	ADAM19	ENSCJAP00000055940	ENSCJAP00000035196	Galectin.	Uncharacterized protein.	0.499
LGALS14	VPS13A	ENSCJAP00000055940	ENSCJAP00000005922	Galectin.	Uncharacterized protein.	0.495
LGI4	ADAM19	ENSCJAP00000019594	ENSCJAP00000035196	Leucine-rich repeat LGI family member 4.	Uncharacterized protein.	0.574
SH3PXD2A	ADAM19	ENSCJAP00000074640	ENSCJAP00000035196	SH3 and PX domains 2A.	Uncharacterized protein.	0.662
SLC12A7	ADAM19	ENSCJAP00000073280	ENSCJAP00000035196	AA_permease domain-containing protein.	Uncharacterized protein.	0.403
SLC12A7	F6ZCB9_CALJA	ENSCJAP00000073280	ENSCJAP00000037865	AA_permease domain-containing protein.	Formin binding protein 1.	0.409
SNAI2	ADAM19	ENSCJAP00000024825	ENSCJAP00000035196	Snail family transcriptional repressor 2.	Uncharacterized protein.	0.448
SPON2	ADAM19	ENSCJAP00000052951	ENSCJAP00000035196	Spondin-2.	Uncharacterized protein.	0.644