STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JKAMPJNK1/MAPK8 associated membrane protein. (325 aa)    
Predicted Functional Partners:
CCDC175
Coiled-coil domain containing 175.
      
 0.645
RNF126
RING finger protein 126.
   
  
 0.568
FAM8A1
Protein FAM8A1.
      
 0.562
UBE2G2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.562
DUSP10
Dual specificity protein phosphatase 10 isoform a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
  
 0.531
AGPAT5
1-acylglycerol-3-phosphate O-acyltransferase 5.
      
 0.509
RBM25
RNA binding motif protein 25.
 
      0.507
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
      
 0.491
GPAT4
Glycerol-3-phosphate acyltransferase 4.
      
 0.483
RNF170
E3 ubiquitin-protein ligase RNF170 isoform a.
      
 0.468
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.