STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAE1Ribonucleic acid export 1. (368 aa)    
Predicted Functional Partners:
NUP214
Nucleoporin 214.
    
 0.996
NUP98
Nucleoporin 98.
   
 0.996
ENSCJAP00000060468
Uncharacterized protein.
   
 0.996
NXF1
Nuclear RNA export factor 1 isoform 1.
    
 0.994
GLE1
Nucleoporin GLE1 isoform 1.
   
 0.982
NXF3
Uncharacterized protein.
    
 0.981
F7IC37_CALJA
NTF2 domain-containing protein.
    
 0.981
NXF2B
Tap-RNA_bind domain-containing protein.
    
 0.980
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.977
RANBP2
RAN binding protein 2.
   
 0.977
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.