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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAT2Adenosine deaminase tRNA specific 2. (197 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthetase.
  
 
 0.874
UPRT
Uracil phosphoribosyltransferase homolog.
   
 0.819
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
    
 0.811
TK1
Thymidine kinase.
    
 0.803
KCNV1
Potassium voltage-gated channel modifier subfamily V member 1; Belongs to the potassium channel family.
      
 0.770
CDA
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
   
 0.747
TRIM2
Tripartite motif-containing protein 2; E3 ubiquitin-protein ligase that mediates the ubiquitination of phosphorylated BCL2L11. Also mediates the UBE2D1-dependent ubiquitination of NEFL. Plays a neuroprotective function. May play a role in neuronal rapid ischemic tolerance.
      
 0.703
DGKB
Diacylglycerol kinase.
      
 0.700
OAT
Ornithine aminotransferase, mitochondrial isoform 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.690
NAGS
N-acetylglutamate synthase.
    
  0.688
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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