STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX2RNA binding protein fox-1 homolog 2 isoform 5. (451 aa)    
Predicted Functional Partners:
QKI
QKI, KH domain containing RNA binding.
   
 
 0.763
RBM24
RNA-binding protein 24 isoform 1.
  
 
 0.693
ENSCJAP00000074699
RRM domain-containing protein.
  
 
 0.681
RBPMS
RNA binding protein, mRNA processing factor.
   
 
 0.632
NOVA2
NOVA alternative splicing regulator 2.
      
 0.590
ENSCJAP00000078861
RRM domain-containing protein.
  
 
0.585
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
  
 
 
 0.584
RBM38
RNA-binding protein 38 isoform a.
  
 
0.584
HNRNPH1
Uncharacterized protein.
    
 0.584
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.583
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.