STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXF2BTap-RNA_bind domain-containing protein. (332 aa)    
Predicted Functional Partners:
RAE1
Ribonucleic acid export 1.
    
 0.980
NXT1
Nuclear transport factor 2 like export factor 1.
    
 0.976
NXT2
Nuclear transport factor 2 like export factor 2.
    
 0.976
THOC5
THO complex subunit 5 homolog.
    
 0.949
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.944
UPF3A
Regulator of nonsense transcripts 3A isoform hUpf3p.
    
 0.941
ENSCJAP00000070523
Smg4_UPF3 domain-containing protein.
    
 0.941
NUP42
Nucleoporin-like protein 2.
     
 0.914
RANBP2
RAN binding protein 2.
    
 0.846
NUP214
Nucleoporin 214.
   
 0.808
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.