STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TANC2Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2. (2005 aa)    
Predicted Functional Partners:
CAPN9
Calpain 9; Belongs to the peptidase C2 family.
   
 0.589
FJX1
Four-jointed box kinase 1.
      
 0.540
ARMC6
Armadillo repeat containing 6.
      
 0.525
RIC8A
RIC8 guanine nucleotide exchange factor A.
      
 0.516
DCAF17
DDB1 and CUL4 associated factor 17.
      
 0.511
PPP6C
Serine/threonine-protein phosphatase.
    
  0.499
LRFN5
Leucine-rich repeat and fibronectin type-III domain-containing protein 5.
   
 0.495
DOHH
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
   
  
 0.454
IFT81
Intraflagellar transport protein 81 homolog isoform 1.
    
 0.429
IFT80
WD_REPEATS_REGION domain-containing protein.
    
 0.418
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.