DNAJA3 protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DNAJA3

DnaJ homolog subfamily A member 3, mitochondrial isoform 1. (480 aa)

Predicted Functional Partners:

HSPA9

0.980

HSPA8

0.837

HSPA14

0.806

HSPA5

0.804

DNAJC12

0.796

HSPA1L

0.782

HSPA13

0.769

GRPEL1

0.762

GRPEL2

0.762

HSPA1A

0.757

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNAJA3	DNAJC12	ENSCJAP00000036858	ENSCJAP00000073655	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	DnaJ homolog subfamily C member 12 isoform a.	0.796
DNAJA3	GRPEL1	ENSCJAP00000036858	ENSCJAP00000053317	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.762
DNAJA3	GRPEL2	ENSCJAP00000036858	ENSCJAP00000058404	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.762
DNAJA3	HSPA13	ENSCJAP00000036858	ENSCJAP00000078435	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	Heat shock protein family A (Hsp70) member 13; Belongs to the heat shock protein 70 family.	0.769
DNAJA3	HSPA14	ENSCJAP00000036858	ENSCJAP00000017175	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	Heat shock protein family A (Hsp70) member 14; Belongs to the heat shock protein 70 family.	0.806
DNAJA3	HSPA1A	ENSCJAP00000036858	ENSCJAP00000004669	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.757
DNAJA3	HSPA1L	ENSCJAP00000036858	ENSCJAP00000055849	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	Heat shock protein family A (Hsp70) member 1 like; Belongs to the heat shock protein 70 family.	0.782
DNAJA3	HSPA5	ENSCJAP00000036858	ENSCJAP00000012786	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.804
DNAJA3	HSPA8	ENSCJAP00000036858	ENSCJAP00000014229	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	Heat shock protein family A (Hsp70) member 8; Belongs to the heat shock protein 70 family.	0.837
DNAJA3	HSPA9	ENSCJAP00000036858	ENSCJAP00000048512	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.	0.980
DNAJC12	DNAJA3	ENSCJAP00000073655	ENSCJAP00000036858	DnaJ homolog subfamily C member 12 isoform a.	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	0.796
DNAJC12	HSPA13	ENSCJAP00000073655	ENSCJAP00000078435	DnaJ homolog subfamily C member 12 isoform a.	Heat shock protein family A (Hsp70) member 13; Belongs to the heat shock protein 70 family.	0.411
DNAJC12	HSPA14	ENSCJAP00000073655	ENSCJAP00000017175	DnaJ homolog subfamily C member 12 isoform a.	Heat shock protein family A (Hsp70) member 14; Belongs to the heat shock protein 70 family.	0.529
DNAJC12	HSPA1L	ENSCJAP00000073655	ENSCJAP00000055849	DnaJ homolog subfamily C member 12 isoform a.	Heat shock protein family A (Hsp70) member 1 like; Belongs to the heat shock protein 70 family.	0.444
DNAJC12	HSPA9	ENSCJAP00000073655	ENSCJAP00000048512	DnaJ homolog subfamily C member 12 isoform a.	Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.	0.420
GRPEL1	DNAJA3	ENSCJAP00000053317	ENSCJAP00000036858	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	DnaJ homolog subfamily A member 3, mitochondrial isoform 1.	0.762
GRPEL1	HSPA13	ENSCJAP00000053317	ENSCJAP00000078435	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Heat shock protein family A (Hsp70) member 13; Belongs to the heat shock protein 70 family.	0.646
GRPEL1	HSPA14	ENSCJAP00000053317	ENSCJAP00000017175	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Heat shock protein family A (Hsp70) member 14; Belongs to the heat shock protein 70 family.	0.646
GRPEL1	HSPA1A	ENSCJAP00000053317	ENSCJAP00000004669	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.650
GRPEL1	HSPA1L	ENSCJAP00000053317	ENSCJAP00000055849	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Heat shock protein family A (Hsp70) member 1 like; Belongs to the heat shock protein 70 family.	0.668