STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDIP1Cell death inducing p53 target 1. (248 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.797
BCAP31
B cell receptor associated protein 31.
      
 0.581
ANPEP
Aminopeptidase.
      
 0.568
NAA60
N(alpha)-acetyltransferase 60, NatF catalytic subunit.
      
 0.555
DDX47
Putative ATP-dependent RNA helicase DDX47 isoform 1; Belongs to the DEAD box helicase family.
    
 0.530
SRP68
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
      
 0.516
KANK2
KN motif and ankyrin repeat domains 2.
    
 
 0.473
IGFALS
Insulin like growth factor binding protein acid labile subunit.
    
 0.468
SNRNP25
Ubiquitin-like domain-containing protein.
      
 0.463
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.462
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.