STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A11Zinc transporter ZIP11 isoform 1. (342 aa)    
Predicted Functional Partners:
SLC30A7
Solute carrier family 30 member 7.
   
 0.674
SLC30A9
Solute carrier family 30 member 9.
  
  
 0.661
SLC39A7
Solute carrier family 39 member 7.
    
 
 0.652
SLC39A9
Solute carrier family 39 member 9.
    
 
 0.649
SLC30A6
Solute carrier family 30 member 6.
   
 0.603
POLE
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
 
   
  0.586
SLC30A4
Solute carrier family 30 member 4.
   
 0.567
SLC39A13
Solute carrier family 39 member 13.
      
 0.564
SLC30A10
Solute carrier family 30 member 10.
   
 0.542
SLC30A1
Zinc transporter 1.
   
 0.542
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.