STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO3A1Solute carrier organic anion transporter family member. (710 aa)    
Predicted Functional Partners:
RFC3
Replication factor C subunit 3 isoform 1.
   
  
 0.582
RAB29
Solute carrier family 41 member 1.
   
  
 0.572
SLC4A7
Anion exchange protein.
      
 0.563
CNNM2
Cyclin and CBS domain divalent metal cation transport mediator 2.
      
 0.561
SLCO5A1
Solute carrier organic anion transporter family member.
      
0.560
FMO4
Dimethylaniline monooxygenase [N-oxide-forming].
   
  
 0.556
FMO1
Dimethylaniline monooxygenase [N-oxide-forming].
   
  
 0.556
TTLL7
Tubulin tyrosine ligase like 7.
   
  
 0.539
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
      
 0.520
KLHL25
Kelch like family member 25.
      
 0.516
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.