STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGA2Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (616 aa)    
Predicted Functional Partners:
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
  
0.959
RABGEF1
Rab5 GDP/GTP exchange factor.
    
 0.945
SORL1
Sortilin related receptor 1.
    
 
 0.901
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.877
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.876
CPQ
Carboxypeptidase Q.
      
 0.811
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.761
BACE1
Beta-secretase 1 isoform A preproprotein; Belongs to the peptidase A1 family.
    
 0.758
SORT1
Sortilin.
    
 
 0.754
CCDC91
Coiled-coil domain-containing protein 91.
    
 
 0.736
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.