STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTBN5Spectrin beta, non-erythrocytic 5. (3672 aa)    
Predicted Functional Partners:
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
0.904
SPTA1
Spectrin alpha, erythrocytic 1.
   
0.861
ANK3
Ankyrin 3.
   
 0.843
ANK1
Ankyrin 1.
   
 0.794
ANK2
Ankyrin 2.
   
 0.750
ITSN2
Intersectin 2.
     
 0.662
ENSCJAP00000078263
Uncharacterized protein.
     
 0.662
TBXA2R
Thromboxane A2 receptor; Belongs to the G-protein coupled receptor 1 family.
     
 0.625
ANKRD60
Ankyrin repeat domain 60.
   
 0.625
IQANK1
IQ motif and ankyrin repeat containing 1.
   
 0.625
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.