STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC17DnaJ homolog subfamily C member 17. (304 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5-like protein.
    
 
 0.778
AKAP3
A-kinase anchoring protein 3.
      
 0.777
F7F6D3_CALJA
Importin subunit alpha; Functions in nuclear protein import.
      
 0.620
FETUB
Fetuin B.
   
 
 0.620
ENSCJAP00000066237
Importin subunit alpha; Functions in nuclear protein import.
      
 0.620
ENSCJAP00000067256
Importin subunit alpha; Functions in nuclear protein import.
      
 0.620
ENSCJAP00000074656
Importin subunit alpha; Functions in nuclear protein import.
      
 0.620
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
      
 0.615
GALNT6
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.570
KPNA5
Importin subunit alpha; Functions in nuclear protein import.
      
 0.565
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.