STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBCK1RANBP2-type and C3HC4-type zinc finger containing 1. (610 aa)    
Predicted Functional Partners:
RNF31
E3 ubiquitin-protein ligase RNF31.
   
 0.999
SHARPIN
SHANK associated RH domain interactor.
   
0.998
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.979
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.978
RIPK1
Receptor-interacting serine/threonine-protein kinase 1.
   
 0.974
TNF
Tumor necrosis factor, membrane form; Cytokine that binds to TNFRSF1A/TNFR1 and TNFRSF1B/TNFBR. It is mainly secreted by macrophages and can induce cell death of certain tumor cell lines. It is potent pyrogen causing fever by direct action or by stimulation of interleukin-1 secretion and is implicated in the induction of cachexia, Under certain conditions it can stimulate cell proliferation and induce cell differentiation (By similarity). Induces insulin resistance in adipocytes via inhibition of insulin-induced IRS1 tyrosine phosphorylation and insulin-induced glucose uptake. Induces [...]
    
 0.964
BIRC2
Baculoviral IAP repeat-containing protein 2 isoform 1.
    
 0.960
XIAP
Baculoviral IAP repeat-containing 4 (Predicted).
    
 0.958
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.953
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.943
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.