STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC52A3Solute carrier family 52, riboflavin transporter, member 3. (469 aa)    
Predicted Functional Partners:
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.839
CLCA2
Chloride channel accessory 2.
      
 0.814
STOX1
Storkhead box 1.
      
 0.800
CLIC5
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.789
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.752
OTOF
Otoferlin.
      
 0.750
AADACL2
Arylacetamide deacetylase like 2.
      
 0.735
RPGRIP1L
RPGRIP1 like.
      
 0.734
TMC1
Transmembrane channel-like protein.
      
 0.727
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.714
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.