STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FERMT1Fermitin family member 1. (717 aa)    
Predicted Functional Partners:
ILK
Integrin linked kinase.
   
 0.828
FBLIM1
Filamin-binding LIM protein 1 isoform a.
    
 0.772
TGM5
Transglutaminase 5.
      
 0.725
TRIP6
Thyroid receptor-interacting protein 6.
    
 0.648
LPP
LIM domain containing preferred translocation partner in lipoma.
    
 0.648
ITGB4
Integrin beta.
   
 0.609
JUP
Junction plakoglobin.
    
 
 0.605
LAMC2
Laminin subunit gamma 2.
   
  
 0.584
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.582
PKP1
Plakophilin 1.
   
 
 0.578
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.