STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC1AC-type lectin domain family 1 member A. (280 aa)    
Predicted Functional Partners:
PRDM2
Uncharacterized protein.
    
 0.594
PDPN
Podoplanin.
    
 0.594
PGLYRP1
Peptidoglycan-recognition protein; Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Involved in innate immunity.
   
  
 0.522
NLRP11
NLR family pyrin domain containing 11.
    
 0.514
FCER1A
Uncharacterized protein.
   
 0.483
ZBTB46
Zinc finger and BTB domain-containing protein 46.
    
 0.472
LCP2
Lymphocyte cytosolic protein 2.
   
 0.453
FCN1
Ficolin 1.
   
 0.444
RNASEL
Ribonuclease L.
   
 0.441
PSMB9
Proteasome subunit beta.
   
  
 0.420
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.