STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC1BC-type lectin domain family 1 member B. (229 aa)    
Predicted Functional Partners:
SYK
Uncharacterized protein.
   
 0.972
PDPN
Podoplanin.
    
 0.971
CLEC4G
C-type lectin domain family 4 member G.
   
 
 0.739
CLEC4E
C-type lectin domain family 4 member E.
   
 
 0.668
LCP2
Lymphocyte cytosolic protein 2.
   
 0.621
PRDM2
Uncharacterized protein.
    
 0.594
FCN3
Ficolin-3 isoform 1.
   
 0.561
PLCG2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.
    
 0.549
F2RL2
Coagulation factor II thrombin receptor like 2.
    
 0.512
VWF
Von Willebrand factor.
     
 0.510
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.