STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCR1X-C motif chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. (333 aa)    
Predicted Functional Partners:
XCL1
SCY domain-containing protein.
   
 0.995
GNAQ
Guanine nucleotide-binding protein G(Q) subunit alpha.
   
  0.923
JAK2
Tyrosine-protein kinase.
   
 0.907
CCL8
C-C motif chemokine ligand 8.
    
 0.818
CCL5
C-C motif chemokine.
   
 0.804
CXCL12
C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.802
CXCL9
C-X-C motif chemokine.
   
 0.798
CLEC9A
C-type lectin domain containing 9A.
   
  
 0.793
CCL2
C-C motif chemokine.
    
 0.770
LOC100385441
SCY domain-containing protein.
   
 0.766
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.