STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH1Atonal bHLH transcription factor 1. (354 aa)    
Predicted Functional Partners:
ASCL1
Achaete-scute family bHLH transcription factor 1.
   
 
 0.721
TCF4
Transcription factor 4.
    
 
 0.690
TCF3
Transcription factor 3.
    
 
 0.690
TCF12
Transcription factor 12 isoform a.
    
 
 0.690
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.688
HES1
Hes family bHLH transcription factor 1.
    
 
 0.609
BARHL1
Uncharacterized protein.
   
  
 0.591
GCM2
Glial cells missing transcription factor 2.
   
  
 0.584
PAX6
Paired box 6.
      
 0.571
DBX1
Developing brain homeobox 1.
   
  
 0.564
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.