STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTBP1Polypyrimidine tract-binding protein 1 isoform a. (557 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform a.
   
 0.882
HNRNPL
Uncharacterized protein.
   
0.861
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.772
SRSF1
Uncharacterized protein.
   
 0.766
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1.
   
 0.754
HNRNPC
Heterogeneous nuclear ribonucleoproteins C1/C2 isoform a.
   
 0.736
PCBP1
Poly(RC)-binding protein 1.
   
 0.731
HNRNPD
Heterogeneous nuclear ribonucleoprotein D0 isoform a.
   
 0.725
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B isoform a.
   
 0.715
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
   
 0.711
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.