STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCMTD1Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1. (357 aa)    
Predicted Functional Partners:
SLC25A32
Mitochondrial folate transporter/carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.552
SCAF11
SR-related CTD associated factor 11.
      
 0.550
PUS7
Pseudouridine synthase 7.
     
 0.534
STK31
Serine/threonine kinase 31.
      
 0.485
TYW1
tRNA wybutosine-synthesizing protein 1 homolog.
   
  
 0.453
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
     
 0.426
SOD2
Superoxide dismutase [Mn], mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.420
WDYHV1
Protein N-terminal glutamine amidohydrolase.
      
 0.405
ENSCJAP00000073360
Nt_Gln_amidase domain-containing protein.
      
 0.405
EPRS1
Uncharacterized protein.
     
 0.401
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.