STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEK10NIMA related kinase 10. (1173 aa)    
Predicted Functional Partners:
LRRN3
Leucine-rich repeat neuronal protein 3.
    
 0.665
PPM1K
Protein phosphatase, Mg2+/Mn2+ dependent 1K.
    
 0.640
C1orf194
Chromosome 1 open reading frame 194.
    
 
 0.565
HSD17B2
Hydroxysteroid 17-beta dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.563
HSD11B1
Hydroxysteroid 11-beta dehydrogenase 1.
    
 0.554
VWA8
Von Willebrand factor A domain containing 8.
    
 0.546
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.530
CSN1S1
Casein alpha s1.
    
 0.513
GREB1
Growth regulating estrogen receptor binding 1.
      
 0.501
MCC
Uncharacterized protein.
   
 
 0.494
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.