STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF385BZinc finger protein 385B. (499 aa)    
Predicted Functional Partners:
KLHL5
Kelch like family member 5.
    
 0.710
KCNS3
Potassium voltage-gated channel modifier subfamily S member 3; Belongs to the potassium channel family.
      
 0.703
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.702
AHI1
Abelson helper integration site 1.
    
 0.620
PCDHB6
Protocadherin beta 6.
     
 0.617
MYCBP2
MYC binding protein 2.
    
 
 0.613
RASD2
RASD family member 2.
    
 0.589
GLRB
Glycine receptor beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.506
SLC5A7
High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.504
NPY5R
Neuropeptide Y receptor Y5.
      
 0.501
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.