STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD44Ankyrin repeat domain 44. (1056 aa)    
Predicted Functional Partners:
PPP6R1
Serine/threonine-protein phosphatase 6 regulatory subunit 1.
    
 0.960
PPP6C
Serine/threonine-protein phosphatase.
    
 0.923
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.915
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.897
ANKRD28
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform a.
  
 
 
0.575
PRAM1
PML-RARA regulated adaptor molecule 1.
    
 
 0.569
ENSCJAP00000077074
ANK_REP_REGION domain-containing protein.
  
 
 
0.567
GOLM1
Golgi membrane protein 1.
      
 0.565
USP10
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
   0.538
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.488
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.