STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSS51MSS51 mitochondrial translational activator. (460 aa)    
Predicted Functional Partners:
F7HMK2_CALJA
Uncharacterized protein.
   
 
 0.883
RIPOR2
RHO family interacting cell polarization regulator 2.
    
 
 0.783
ACTC1
Uncharacterized protein.
   
 
 0.642
EED
Embryonic ectoderm development.
   
 0.617
ANKRD37
Ankyrin repeat domain 37.
    
 0.612
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.598
ASH2L
B30.2/SPRY domain-containing protein.
    
 0.593
RBBP5
Uncharacterized protein.
    
 0.593
ALPK3
Alpha kinase 3.
    
 
 0.579
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
   
 
 0.560
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.