STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPIFA1BPI fold containing family A member 1. (255 aa)    
Predicted Functional Partners:
BPIFB1
BPI fold containing family B member 1.
 
 
 
0.860
FAM3D
Family with sequence similarity 3 member D.
      
 0.812
F6XA79_CALJA
BPI fold containing family B member 4.
   
 
 0.707
BPIFA2
BPI fold containing family A member 2.
 
 
 
0.635
RARRES1
Retinoic acid receptor responder 1.
   
  
 0.585
BST2
Bone marrow stromal cell antigen 2.
   
  
 0.584
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
  
 0.562
BPIFB2
BPI fold containing family B member 2.
   
 
 0.528
PLTP
Phospholipid transfer protein.
   
 
 0.503
F6ZYU3_CALJA
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.487
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.