STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELLL-selectin; Calcium-dependent lectin that mediates cell adhesion by binding to glycoproteins on neighboring cells. Mediates the adherence of lymphocytes to endothelial cells of high endothelial venules in peripheral lymph nodes. Promotes initial tethering and rolling of leukocytes in endothelia. (385 aa)    
Predicted Functional Partners:
CD34
Hematopoietic progenitor cell antigen CD34 isoform a.
   
 
 0.991
MADCAM1
Mucosal vascular addressin cell adhesion molecule 1.
    
 0.869
CD44
CD44 molecule (Indian blood group).
   
 0.861
VCAM1
Vascular cell adhesion molecule 1.
   
 
 0.796
CCR7
C-C motif chemokine receptor 7; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.796
ICAM1
Intercellular adhesion molecule 1.
   
 
 0.779
ITGB2
Integrin beta.
   
 0.771
CD4
Ig-like domain-containing protein.
    
 0.746
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.730
CCL19
C-C motif chemokine.
   
  
 0.730
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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