STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (348 aa)    
Predicted Functional Partners:
TBP
TATA-box binding protein.
    
 0.924
TCF3
Transcription factor 3.
   
 0.921
TBPL2
TATA-box binding protein like 2.
    
 0.915
TCF12
Transcription factor 12 isoform a.
   
 0.910
TBPL1
TATA box-binding protein-like protein 1.
    
 0.905
TCF4
Transcription factor 4.
   
 0.880
EP300
E1A binding protein p300.
    
 
 0.879
KAT2B
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 
 0.854
ID1
DNA-binding protein inhibitor ID-1 isoform a.
    
 
 0.784
ENSCJAP00000061225
Myocyte enhancer factor 2A.
    
 0.758
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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