STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS7Pseudouridine synthase 7. (660 aa)    
Predicted Functional Partners:
NSUN2
NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.918
EFHD2
EF-hand domain family member D2.
      
 0.894
NOC3L
Nucleolar complex protein 3 homolog.
   
   0.863
RPUSD2
RNA pseudouridylate synthase domain-containing protein 2.
    
 
 0.827
DOP1A
DOP1 leucine zipper like protein A.
      
 0.820
RIT2
GTP-binding protein Rit2 isoform 1.
   
  
 0.816
PUS3
Pseudouridine synthase 3.
   
 
 0.810
MRM3
Mitochondrial rRNA methyltransferase 3.
   
 
 0.794
RBM28
RNA-binding protein 28 isoform 1.
   
    0.782
UTP4
UTP4 small subunit processome component.
   
    0.780
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.