STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10858999160S ribosomal protein L39. (51 aa)    
Predicted Functional Partners:
RPL36A
Ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.976
ENSCJAP00000078156
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.972
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.968
ENSCJAP00000077762
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.968
ENSCJAP00000078253
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.968
RPL14
Ribosomal_L14e domain-containing protein.
   
 0.948
RPL11
60S ribosomal protein L11 isoform 1; Belongs to the universal ribosomal protein uL5 family.
   
 0.942
RPL35
Ribosomal protein L35.
   
 0.941
RPLP2
Ribosomal protein lateral stalk subunit P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.932
RPS16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.929
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.